基于转录组学与生信分析解析钙化性主动脉瓣疾病的核心调控网络Transcriptomic and bioinformatic dissection of core regulatory networks in calcific aortic valve disease
赵鹏辉,陈露,蔡嘉庚,徐媛,李显龙,祖凌云
摘要(Abstract):
目的 钙化性主动脉瓣疾病(CAVD)是第三大心血管病,临床确诊常处于晚期阶段,且治疗多依赖瓣膜置换术。本研究旨在探索CAVD的潜在分子机制与药物靶点。方法 本研究收集2022年11月至2023年10月北京大学第三医院人心脏外科术后瓣膜样本(CAVD组、对照组各3例)开展转录组测序并采用R语言进行生信分析。结果 鉴定出506个差异表达基因(上调216个、下调290个)。基因本体论(GO)富集分析表明,B细胞介导的免疫应答等功能显著富集;京都基因和基因组百科全书(KEGG)富集结果显示,硒化合物代谢、甘氨酸/丝氨酸/苏氨酸代谢、细胞外基质-受体相互作用等多条通路显著参与。结合基因表达综合数据库(GEO)数据集交叉验证,发现IBSP等基因在CAVD组表达显著异常,支持其与CAVD密切相关。基于Connectivity Map(CMap)预测,PP-2(SRC抑制剂)与GDC-0941(PI3K抑制剂)与成骨/矿化过程相关,且分子对接结果提示二者均与靶蛋白IBSP结合良好。结论 代谢网络及细胞外基质-受体相互作用可能是CAVD的重要调控通路,IBSP等基因有望作为干预靶点;PP-2与GDC-0941或可分别通过SRC–IBSP轴与PI3K–AKT–RUNX2–IBSP轴调控主动脉瓣的病理性钙化,值得进一步验证。
关键词(KeyWords): 钙化性主动脉瓣疾病;分子机制;抗钙化靶点;转录组学;生物信息学
基金项目(Foundation): 国家重点研发计划项目(2022YFB3807300)
作者(Author): 赵鹏辉,陈露,蔡嘉庚,徐媛,李显龙,祖凌云
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